Forms and Tariffs
Please, if you start for a legitimate user of the microscopes at the imaging core facility, download the attached forms and fill it out thoroughly. Send it separately to one of the contact persons.
Useful free software
LASX
The “Leica LAS X Office” is the free-to-use version of the Leica LAS X software. It provides essential functionalities for “image analysis and visualization” but does not support hardware control or image acquisition.
https://www.leica-microsystems.com/products/microscope-software/p/leica-las-x-ls/#downloads
FIJI
“FIJI” (Fiji Is Just ImageJ) is a powerful, free, open-source microscopy software. It's built on “ImageJ” and extends its capabilities with a comprehensive package of plugins for image processing and analysis. FIJI supports multi-dimensional data, provides a user-friendly interface, and is widely used in the scientific community for tasks ranging from basic image adjustments to advanced computational analysis.
CellProfiler
“CellProfiler” is a free, open-source software designed for biological image analysis. It enables users to “automatically identify and quantify” cells and other biological objects in images. With its extensive range of customizable modules and user-friendly interface, CellProfiler is widely used in research for high-throughput image analysis, facilitating insights into cellular morphology, behavior, and interactions.
https://cellprofiler.org/releases
QuPath
“QuPath” is a powerful, free, open-source software designed for “digital pathology” and bioimage analysis. It offers a wide range of tools for visualizing, annotating, and analyzing whole slide images and other large, complex datasets. With its user-friendly interface and support for custom scripting, QuPath is widely used in research and clinical settings to facilitate high-throughput tissue analysis and quantification.
ilastik
“ilastik” is a free, open-source software designed for interactive and machine learning-based image analysis. It allows users to easily classify, segment, and track biological images without the need for extensive coding knowledge. With its intuitive interface and robust set of tools, ilastik simplifies complex image analysis tasks, making it accessible for researchers in various scientific fields.
https://www.ilastik.org/download
Imaris Viewer
“Imaris Viewer” is a free, versatile software designed for visualizing and exploring 3D and 4D microscopy data. It provides a user-friendly interface for navigating complex datasets, enabling researchers to easily view, annotate, and share their images. Imaris Viewer supports a wide range of file formats and is widely used in the scientific community for detailed data visualization and analysis.
https://imaris.oxinst.com/imaris-viewer